Short sequence motif dynamics in the SARS-CoV-2 genome suggest a role for cytosine deamination in CpG reduction

Mukhtar Sadykov; Tobias Mourier; Qingtian Guan; Arnab Pain

doi:10.1093/jmcb/mjab011

Short sequence motif dynamics in the SARS-CoV-2 genome suggest a role for cytosine deamination in CpG reduction

Mukhtar Sadykov, Tobias Mourier, Qingtian Guan, Arnab Pain^*

^*Corresponding author for this work

Research output: Contribution to journal › Letter › peer-review

12 Scopus citations

Original language	English (US)
Pages (from-to)	225-227
Number of pages	3
Journal	Journal of Molecular Cell Biology
Volume	13
Issue number	3
DOIs	https://doi.org/10.1093/jmcb/mjab011
State	Published - Mar 1 2021

Bibliographical note

Funding Information:
We thank all laboratories that have contributed sequences to the GISAID database and Zhadyra Yerkesh for giving her comments and helpful discussions. This work was supported by funding from King Abdullah University of Science and Technology (KAUST) R3T initiative. Work in A.P.’s laboratory is supported by the KAUST Faculty Baseline Fund (BAS/1/1020-01-01). A.P. supervised the project. M.S. and T.M. designed experiments. T.M. and Q.G. performed bioinformatic analysis. M.S. wrote the draft of the manuscript. All authors discussed, edited, read, and agreed to the final version of the manuscript.]

ASJC Scopus subject areas

Molecular Biology
Genetics
Cell Biology

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10.1093/jmcb/mjab011

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title = "Short sequence motif dynamics in the SARS-CoV-2 genome suggest a role for cytosine deamination in CpG reduction",

author = "Mukhtar Sadykov and Tobias Mourier and Qingtian Guan and Arnab Pain",

note = "Funding Information: We thank all laboratories that have contributed sequences to the GISAID database and Zhadyra Yerkesh for giving her comments and helpful discussions. This work was supported by funding from King Abdullah University of Science and Technology (KAUST) R3T initiative. Work in A.P.{\textquoteright}s laboratory is supported by the KAUST Faculty Baseline Fund (BAS/1/1020-01-01). A.P. supervised the project. M.S. and T.M. designed experiments. T.M. and Q.G. performed bioinformatic analysis. M.S. wrote the draft of the manuscript. All authors discussed, edited, read, and agreed to the final version of the manuscript.]",

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T1 - Short sequence motif dynamics in the SARS-CoV-2 genome suggest a role for cytosine deamination in CpG reduction

AU - Sadykov, Mukhtar

AU - Mourier, Tobias

AU - Guan, Qingtian

AU - Pain, Arnab

N1 - Funding Information: We thank all laboratories that have contributed sequences to the GISAID database and Zhadyra Yerkesh for giving her comments and helpful discussions. This work was supported by funding from King Abdullah University of Science and Technology (KAUST) R3T initiative. Work in A.P.’s laboratory is supported by the KAUST Faculty Baseline Fund (BAS/1/1020-01-01). A.P. supervised the project. M.S. and T.M. designed experiments. T.M. and Q.G. performed bioinformatic analysis. M.S. wrote the draft of the manuscript. All authors discussed, edited, read, and agreed to the final version of the manuscript.]

PY - 2021/3/1

Y1 - 2021/3/1

UR - http://www.scopus.com/inward/record.url?scp=85106531051&partnerID=8YFLogxK

U2 - 10.1093/jmcb/mjab011

DO - 10.1093/jmcb/mjab011

M3 - Letter

C2 - 33630074

AN - SCOPUS:85106531051

SN - 1674-2788

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SP - 225

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JO - Journal of Molecular Cell Biology

JF - Journal of Molecular Cell Biology

IS - 3

ER -

Short sequence motif dynamics in the SARS-CoV-2 genome suggest a role for cytosine deamination in CpG reduction

Bibliographical note

ASJC Scopus subject areas

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