Recombination Accelerates Adaptation on a Large-Scale Empirical Fitness Landscape in HIV-1

Danesh Moradigaravand, Roger Kouyos, Trevor Hinkley, Mojgan Haddad, Christos J. Petropoulos, Jan Engelstädter, Sebastian Bonhoeffer

Research output: Contribution to journalArticlepeer-review

32 Scopus citations

Abstract

Recombination has the potential to facilitate adaptation. In spite of the substantial body of theory on the impact of recombination on the evolutionary dynamics of adapting populations, empirical evidence to test these theories is still scarce. We examined the effect of recombination on adaptation on a large-scale empirical fitness landscape in HIV-1 based on in vitro fitness measurements. Our results indicate that recombination substantially increases the rate of adaptation under a wide range of parameter values for population size, mutation rate and recombination rate. The accelerating effect of recombination is stronger for intermediate mutation rates but increases in a monotonic way with the recombination rates and population sizes that we examined. We also found that both fitness effects of individual mutations and epistatic fitness interactions cause recombination to accelerate adaptation. The estimated epistasis in the adapting populations is significantly negative. Our results highlight the importance of recombination in the evolution of HIV-I. © 2014 Moradigaravand et al.
Original languageEnglish (US)
JournalPLoS Genetics
Volume10
Issue number6
DOIs
StatePublished - Jan 1 2014
Externally publishedYes

Bibliographical note

Generated from Scopus record by KAUST IRTS on 2023-02-15

ASJC Scopus subject areas

  • Ecology, Evolution, Behavior and Systematics
  • Genetics
  • Molecular Biology
  • Genetics(clinical)
  • Cancer Research

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