TY - JOUR
T1 - Hybrid Direct and Iterative Solver with Library of Multi-criteria Optimal Orderings for h Adaptive Finite Element Method Computations
AU - AbouEisha, Hassan M.
AU - Jopek, Konrad
AU - Medygrał, Bartłomiej
AU - Moshkov, Mikhail
AU - Nosek, Szymon
AU - Paszyńska, Anna
AU - Paszyński, Maciej
AU - Pingali, Keshav
N1 - KAUST Repository Item: Exported on 2020-10-01
Acknowledgements: The work presented in this paper has been supported by National Science Centre, Poland grant no. DEC-2015/17/B/ST6/01867 and by King Abdullah University of Science and Technology (KAUST).
PY - 2016/6/2
Y1 - 2016/6/2
N2 - In this paper we present a multi-criteria optimization of element partition trees and resulting orderings for multi-frontal solver algorithms executed for two dimensional h adaptive finite element method. In particular, the problem of optimal ordering of elimination of rows in the sparse matrices resulting from adaptive finite element method computations is reduced to the problem of finding of optimal element partition trees. Given a two dimensional h refined mesh, we find all optimal element partition trees by using the dynamic programming approach. An element partition tree defines a prescribed order of elimination of degrees of freedom over the mesh. We utilize three different metrics to estimate the quality of the element partition tree. As the first criterion we consider the number of floating point operations(FLOPs) performed by the multi-frontal solver. As the second criterion we consider the number of memory transfers (MEMOPS) performed by the multi-frontal solver algorithm. As the third criterion we consider memory usage (NONZEROS) of the multi-frontal direct solver. We show the optimization results for FLOPs vs MEMOPS as well as for the execution time estimated as FLOPs+100MEMOPS vs NONZEROS. We obtain Pareto fronts with multiple optimal trees, for each mesh, and for each refinement level. We generate a library of optimal elimination trees for small grids with local singularities. We also propose an algorithm that for a given large mesh with identified local sub-grids, each one with local singularity. We compute Schur complements over the sub-grids using the optimal trees from the library, and we submit the sequence of Schur complements into the iterative solver ILUPCG.
AB - In this paper we present a multi-criteria optimization of element partition trees and resulting orderings for multi-frontal solver algorithms executed for two dimensional h adaptive finite element method. In particular, the problem of optimal ordering of elimination of rows in the sparse matrices resulting from adaptive finite element method computations is reduced to the problem of finding of optimal element partition trees. Given a two dimensional h refined mesh, we find all optimal element partition trees by using the dynamic programming approach. An element partition tree defines a prescribed order of elimination of degrees of freedom over the mesh. We utilize three different metrics to estimate the quality of the element partition tree. As the first criterion we consider the number of floating point operations(FLOPs) performed by the multi-frontal solver. As the second criterion we consider the number of memory transfers (MEMOPS) performed by the multi-frontal solver algorithm. As the third criterion we consider memory usage (NONZEROS) of the multi-frontal direct solver. We show the optimization results for FLOPs vs MEMOPS as well as for the execution time estimated as FLOPs+100MEMOPS vs NONZEROS. We obtain Pareto fronts with multiple optimal trees, for each mesh, and for each refinement level. We generate a library of optimal elimination trees for small grids with local singularities. We also propose an algorithm that for a given large mesh with identified local sub-grids, each one with local singularity. We compute Schur complements over the sub-grids using the optimal trees from the library, and we submit the sequence of Schur complements into the iterative solver ILUPCG.
UR - http://hdl.handle.net/10754/626065
UR - http://www.sciencedirect.com/science/article/pii/S1877050916306706
UR - http://www.scopus.com/inward/record.url?scp=84978518609&partnerID=8YFLogxK
U2 - 10.1016/j.procs.2016.05.312
DO - 10.1016/j.procs.2016.05.312
M3 - Article
SN - 1877-0509
VL - 80
SP - 865
EP - 874
JO - Procedia Computer Science
JF - Procedia Computer Science
ER -