Genetic design automation

Chris J. Myers; Nathan Barker; Hiroyuki Kuwahara; Kevin Jones; Curtis Madsen; Nam Phuong D. Nguyen

doi:10.1145/1687399.1687531

Genetic design automation

Chris J. Myers, Nathan Barker, Hiroyuki Kuwahara, Kevin Jones, Curtis Madsen, Nam Phuong D. Nguyen

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

8 Scopus citations

Abstract

Electronic design automation (EDA) tools have facilitated the design of ever more complex integrated circuits each year. Synthetic biology would also benefit from the development of genetic design automation (GDA) tools. Existing GDA tools require biologists to design genetic circuits at the molecular level, roughly equivalent to designing electronic circuits at the layout level. Analysis of these circuits is also performed at this very low level. This paper presents the background and issues involved in the development of such a GDA tool for modeling, analysis, and design.

Original language	English (US)
Title of host publication	Proceedings of the 2009 IEEE/ACM International Conference on Computer-Aided Design - Digest of Technical Papers, ICCAD 2009
Publisher	Institute of Electrical and Electronics Engineers Inc.
Pages	713-716
Number of pages	4
ISBN (Print)	9781605588001
DOIs	https://doi.org/10.1145/1687399.1687531
State	Published - 2009
Externally published	Yes
Event	2009 IEEE/ACM International Conference on Computer-Aided Design, ICCAD 2009 - San Jose, CA, United States Duration: Nov 2 2009 → Nov 5 2009

Publication series

Name	IEEE/ACM International Conference on Computer-Aided Design, Digest of Technical Papers, ICCAD
ISSN (Print)	1092-3152

Other

Other	2009 IEEE/ACM International Conference on Computer-Aided Design, ICCAD 2009
Country/Territory	United States
City	San Jose, CA
Period	11/2/09 → 11/5/09

ASJC Scopus subject areas

Software
Computer Science Applications
Computer Graphics and Computer-Aided Design

Access to Document

10.1145/1687399.1687531

Cite this

Myers, C. J., Barker, N., Kuwahara, H., Jones, K., Madsen, C., & Nguyen, N. P. D. (2009). Genetic design automation. In Proceedings of the 2009 IEEE/ACM International Conference on Computer-Aided Design - Digest of Technical Papers, ICCAD 2009 (pp. 713-716). Article 5361217 (IEEE/ACM International Conference on Computer-Aided Design, Digest of Technical Papers, ICCAD). Institute of Electrical and Electronics Engineers Inc.. https://doi.org/10.1145/1687399.1687531

Myers, Chris J. ; Barker, Nathan ; Kuwahara, Hiroyuki et al. / Genetic design automation. Proceedings of the 2009 IEEE/ACM International Conference on Computer-Aided Design - Digest of Technical Papers, ICCAD 2009. Institute of Electrical and Electronics Engineers Inc., 2009. pp. 713-716 (IEEE/ACM International Conference on Computer-Aided Design, Digest of Technical Papers, ICCAD).

@inproceedings{9674b130368b4fa8b24856e629b42234,

title = "Genetic design automation",

abstract = "Electronic design automation (EDA) tools have facilitated the design of ever more complex integrated circuits each year. Synthetic biology would also benefit from the development of genetic design automation (GDA) tools. Existing GDA tools require biologists to design genetic circuits at the molecular level, roughly equivalent to designing electronic circuits at the layout level. Analysis of these circuits is also performed at this very low level. This paper presents the background and issues involved in the development of such a GDA tool for modeling, analysis, and design.",

author = "Myers, {Chris J.} and Nathan Barker and Hiroyuki Kuwahara and Kevin Jones and Curtis Madsen and Nguyen, {Nam Phuong D.}",

year = "2009",

doi = "10.1145/1687399.1687531",

language = "English (US)",

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series = "IEEE/ACM International Conference on Computer-Aided Design, Digest of Technical Papers, ICCAD",

publisher = "Institute of Electrical and Electronics Engineers Inc.",

pages = "713--716",

booktitle = "Proceedings of the 2009 IEEE/ACM International Conference on Computer-Aided Design - Digest of Technical Papers, ICCAD 2009",

address = "United States",

note = "2009 IEEE/ACM International Conference on Computer-Aided Design, ICCAD 2009 ; Conference date: 02-11-2009 Through 05-11-2009",

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Myers, CJ, Barker, N, Kuwahara, H, Jones, K, Madsen, C & Nguyen, NPD 2009, Genetic design automation. in Proceedings of the 2009 IEEE/ACM International Conference on Computer-Aided Design - Digest of Technical Papers, ICCAD 2009., 5361217, IEEE/ACM International Conference on Computer-Aided Design, Digest of Technical Papers, ICCAD, Institute of Electrical and Electronics Engineers Inc., pp. 713-716, 2009 IEEE/ACM International Conference on Computer-Aided Design, ICCAD 2009, San Jose, CA, United States, 11/2/09. https://doi.org/10.1145/1687399.1687531

Genetic design automation. / Myers, Chris J.; Barker, Nathan; Kuwahara, Hiroyuki et al.
Proceedings of the 2009 IEEE/ACM International Conference on Computer-Aided Design - Digest of Technical Papers, ICCAD 2009. Institute of Electrical and Electronics Engineers Inc., 2009. p. 713-716 5361217 (IEEE/ACM International Conference on Computer-Aided Design, Digest of Technical Papers, ICCAD).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

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T1 - Genetic design automation

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AU - Barker, Nathan

AU - Kuwahara, Hiroyuki

AU - Jones, Kevin

AU - Madsen, Curtis

AU - Nguyen, Nam Phuong D.

PY - 2009

Y1 - 2009

N2 - Electronic design automation (EDA) tools have facilitated the design of ever more complex integrated circuits each year. Synthetic biology would also benefit from the development of genetic design automation (GDA) tools. Existing GDA tools require biologists to design genetic circuits at the molecular level, roughly equivalent to designing electronic circuits at the layout level. Analysis of these circuits is also performed at this very low level. This paper presents the background and issues involved in the development of such a GDA tool for modeling, analysis, and design.

AB - Electronic design automation (EDA) tools have facilitated the design of ever more complex integrated circuits each year. Synthetic biology would also benefit from the development of genetic design automation (GDA) tools. Existing GDA tools require biologists to design genetic circuits at the molecular level, roughly equivalent to designing electronic circuits at the layout level. Analysis of these circuits is also performed at this very low level. This paper presents the background and issues involved in the development of such a GDA tool for modeling, analysis, and design.

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DO - 10.1145/1687399.1687531

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BT - Proceedings of the 2009 IEEE/ACM International Conference on Computer-Aided Design - Digest of Technical Papers, ICCAD 2009

PB - Institute of Electrical and Electronics Engineers Inc.

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ER -

Myers CJ, Barker N, Kuwahara H, Jones K, Madsen C, Nguyen NPD. Genetic design automation. In Proceedings of the 2009 IEEE/ACM International Conference on Computer-Aided Design - Digest of Technical Papers, ICCAD 2009. Institute of Electrical and Electronics Engineers Inc. 2009. p. 713-716. 5361217. (IEEE/ACM International Conference on Computer-Aided Design, Digest of Technical Papers, ICCAD). doi: 10.1145/1687399.1687531

Genetic design automation

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