EMBRACE: Bioinformatics data and analysis tool services for e-Science

Peter M. Rice; Alan J. Bleasby; Syed A. Haider; Jon C. Ison; Shaun McGlinchey; Mahmut Uludag

doi:10.1109/E-SCIENCE.2006.261079

EMBRACE: Bioinformatics data and analysis tool services for e-Science

Peter M. Rice^*, Alan J. Bleasby, Syed A. Haider, Jon C. Ison, Shaun McGlinchey, Mahmut Uludag

^*Corresponding author for this work

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

3 Scopus citations

Abstract

The EMBRACE project is a network of European partners providing services which integrate the major data resources and analysis software tools using web services and emerging grid technologies. Prototype services are available for the core data resources and the most commonly used tools for sequence analysis. Data access uses the WSDbFetch and BioMart services from the European Bioinformatics Institute. Software tool services use the SoapLab services, also from the European Bioinformatics Institute. The preferred client for these services is Taverna from the my Grid project. Subprojects are collecting and analyzing biological use cases, and maintaining a watch on emerging grid technology in Europe.

Original language	English (US)
Title of host publication	e-Science 2006 - Second IEEE International Conference on e-Science and Grid Computing
Publisher	IEEE Computer Society
Pages	146-150
Number of pages	5
ISBN (Print)	0769527345, 9780769527345
DOIs	https://doi.org/10.1109/E-SCIENCE.2006.261079
State	Published - 2006
Externally published	Yes
Event	e-Science 2006 - 2nd IEEE International Conference on e-Science and Grid Computing - Amsterdam, Netherlands Duration: Dec 4 2006 → Dec 6 2006

Publication series

Name	e-Science 2006 - Second IEEE International Conference on e-Science and Grid Computing

Other

Other	e-Science 2006 - 2nd IEEE International Conference on e-Science and Grid Computing
Country/Territory	Netherlands
City	Amsterdam
Period	12/4/06 → 12/6/06

ASJC Scopus subject areas

Computer Networks and Communications
Hardware and Architecture
Software

Access to Document

10.1109/E-SCIENCE.2006.261079

Cite this

Rice, P. M., Bleasby, A. J., Haider, S. A., Ison, J. C., McGlinchey, S., & Uludag, M. (2006). EMBRACE: Bioinformatics data and analysis tool services for e-Science. In e-Science 2006 - Second IEEE International Conference on e-Science and Grid Computing (pp. 146-150). Article 4031119 (e-Science 2006 - Second IEEE International Conference on e-Science and Grid Computing). IEEE Computer Society. https://doi.org/10.1109/E-SCIENCE.2006.261079

@inproceedings{8958556b84bc4f4eb819456a65ba586f,

title = "EMBRACE: Bioinformatics data and analysis tool services for e-Science",

abstract = "The EMBRACE project is a network of European partners providing services which integrate the major data resources and analysis software tools using web services and emerging grid technologies. Prototype services are available for the core data resources and the most commonly used tools for sequence analysis. Data access uses the WSDbFetch and BioMart services from the European Bioinformatics Institute. Software tool services use the SoapLab services, also from the European Bioinformatics Institute. The preferred client for these services is Taverna from the my Grid project. Subprojects are collecting and analyzing biological use cases, and maintaining a watch on emerging grid technology in Europe.",

author = "Rice, {Peter M.} and Bleasby, {Alan J.} and Haider, {Syed A.} and Ison, {Jon C.} and Shaun McGlinchey and Mahmut Uludag",

year = "2006",

doi = "10.1109/E-SCIENCE.2006.261079",

language = "English (US)",

isbn = "0769527345",

series = "e-Science 2006 - Second IEEE International Conference on e-Science and Grid Computing",

publisher = "IEEE Computer Society",

pages = "146--150",

booktitle = "e-Science 2006 - Second IEEE International Conference on e-Science and Grid Computing",

address = "United States",

note = "e-Science 2006 - 2nd IEEE International Conference on e-Science and Grid Computing ; Conference date: 04-12-2006 Through 06-12-2006",

}

Rice, PM, Bleasby, AJ, Haider, SA, Ison, JC, McGlinchey, S & Uludag, M 2006, EMBRACE: Bioinformatics data and analysis tool services for e-Science. in e-Science 2006 - Second IEEE International Conference on e-Science and Grid Computing., 4031119, e-Science 2006 - Second IEEE International Conference on e-Science and Grid Computing, IEEE Computer Society, pp. 146-150, e-Science 2006 - 2nd IEEE International Conference on e-Science and Grid Computing, Amsterdam, Netherlands, 12/4/06. https://doi.org/10.1109/E-SCIENCE.2006.261079

EMBRACE: Bioinformatics data and analysis tool services for e-Science. / Rice, Peter M.; Bleasby, Alan J.; Haider, Syed A. et al.
e-Science 2006 - Second IEEE International Conference on e-Science and Grid Computing. IEEE Computer Society, 2006. p. 146-150 4031119 (e-Science 2006 - Second IEEE International Conference on e-Science and Grid Computing).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

TY - GEN

T1 - EMBRACE

T2 - e-Science 2006 - 2nd IEEE International Conference on e-Science and Grid Computing

AU - Rice, Peter M.

AU - Bleasby, Alan J.

AU - Haider, Syed A.

AU - Ison, Jon C.

AU - McGlinchey, Shaun

AU - Uludag, Mahmut

PY - 2006

Y1 - 2006

N2 - The EMBRACE project is a network of European partners providing services which integrate the major data resources and analysis software tools using web services and emerging grid technologies. Prototype services are available for the core data resources and the most commonly used tools for sequence analysis. Data access uses the WSDbFetch and BioMart services from the European Bioinformatics Institute. Software tool services use the SoapLab services, also from the European Bioinformatics Institute. The preferred client for these services is Taverna from the my Grid project. Subprojects are collecting and analyzing biological use cases, and maintaining a watch on emerging grid technology in Europe.

AB - The EMBRACE project is a network of European partners providing services which integrate the major data resources and analysis software tools using web services and emerging grid technologies. Prototype services are available for the core data resources and the most commonly used tools for sequence analysis. Data access uses the WSDbFetch and BioMart services from the European Bioinformatics Institute. Software tool services use the SoapLab services, also from the European Bioinformatics Institute. The preferred client for these services is Taverna from the my Grid project. Subprojects are collecting and analyzing biological use cases, and maintaining a watch on emerging grid technology in Europe.

UR - http://www.scopus.com/inward/record.url?scp=38449097127&partnerID=8YFLogxK

U2 - 10.1109/E-SCIENCE.2006.261079

DO - 10.1109/E-SCIENCE.2006.261079

M3 - Conference contribution

AN - SCOPUS:38449097127

SN - 0769527345

SN - 9780769527345

T3 - e-Science 2006 - Second IEEE International Conference on e-Science and Grid Computing

SP - 146

EP - 150

BT - e-Science 2006 - Second IEEE International Conference on e-Science and Grid Computing

PB - IEEE Computer Society

Y2 - 4 December 2006 through 6 December 2006

ER -

Rice PM, Bleasby AJ, Haider SA, Ison JC, McGlinchey S, Uludag M. EMBRACE: Bioinformatics data and analysis tool services for e-Science. In e-Science 2006 - Second IEEE International Conference on e-Science and Grid Computing. IEEE Computer Society. 2006. p. 146-150. 4031119. (e-Science 2006 - Second IEEE International Conference on e-Science and Grid Computing). doi: 10.1109/E-SCIENCE.2006.261079

EMBRACE: Bioinformatics data and analysis tool services for e-Science

Abstract

Publication series

Other

ASJC Scopus subject areas

Access to Document

Other files and links

Fingerprint

Cite this