Draft Genome Sequence of a Novel Marine Anaerobic Ammonium-Oxidizing Bacterium, “Candidatus Scalindua sp.”

Muhammad Ali; Dario Rangel Shaw; Pascal Saikaly

doi:10.1128/mra.00297-19

Draft Genome Sequence of a Novel Marine Anaerobic Ammonium-Oxidizing Bacterium, “Candidatus Scalindua sp.”

Muhammad Ali, Dario Rangel Shaw, Pascal Saikaly

Research output: Contribution to journal › Article › peer-review

8 Scopus citations

Abstract

A novel anaerobic ammonium-oxidizing (anammox) bacterium was detected in an upflow column reactor treating synthetic nitrogen-rich saline solution. Here, we assembled a 4.59-Mb draft genome sequence of this bacterium, identified as a member of the genus “Candidatus Scalindua,” that has 84% nucleotide-level genomic similarity with the closest related anammox bacterium (“Candidatus Scalindua rubra”).

Original language	English (US)
Journal	Microbiology Resource Announcements
Volume	8
Issue number	20
DOIs	https://doi.org/10.1128/mra.00297-19
State	Published - May 16 2019

Bibliographical note

KAUST Repository Item: Exported on 2020-10-01
Acknowledged KAUST grant number(s): FCC/1/1971-33-01
Acknowledgements: This work was funded by the Center Competitive Funding Program (grant FCC/1/1971-33-01) to P.E.S. from the King Abdullah University of Science and Technology (KAUST).

UN SDGs

This output contributes to the following UN Sustainable Development Goals (SDGs)

Access to Document

10.1128/mra.00297-19

https://repository.kaust.edu.sa/bitstream/10754/656195/1/Microbiology%20Resource%20Announcements-2019-Ali-e00297-19.full.pdf

Cite this

@article{d6c35a14e4934c09bd32de5ef5f13a56,

title = "Draft Genome Sequence of a Novel Marine Anaerobic Ammonium-Oxidizing Bacterium, “Candidatus Scalindua sp.”",

abstract = "A novel anaerobic ammonium-oxidizing (anammox) bacterium was detected in an upflow column reactor treating synthetic nitrogen-rich saline solution. Here, we assembled a 4.59-Mb draft genome sequence of this bacterium, identified as a member of the genus “Candidatus Scalindua,” that has 84% nucleotide-level genomic similarity with the closest related anammox bacterium (“Candidatus Scalindua rubra”).",

author = "Muhammad Ali and Shaw, {Dario Rangel} and Pascal Saikaly",

note = "KAUST Repository Item: Exported on 2020-10-01 Acknowledged KAUST grant number(s): FCC/1/1971-33-01 Acknowledgements: This work was funded by the Center Competitive Funding Program (grant FCC/1/1971-33-01) to P.E.S. from the King Abdullah University of Science and Technology (KAUST).",

year = "2019",

month = may,

day = "16",

doi = "10.1128/mra.00297-19",

language = "English (US)",

volume = "8",

journal = "Microbiology Resource Announcements",

issn = "2576-098X",

publisher = "American Society for Microbiology",

number = "20",

}

TY - JOUR

T1 - Draft Genome Sequence of a Novel Marine Anaerobic Ammonium-Oxidizing Bacterium, “Candidatus Scalindua sp.”

AU - Ali, Muhammad

AU - Shaw, Dario Rangel

AU - Saikaly, Pascal

N1 - KAUST Repository Item: Exported on 2020-10-01 Acknowledged KAUST grant number(s): FCC/1/1971-33-01 Acknowledgements: This work was funded by the Center Competitive Funding Program (grant FCC/1/1971-33-01) to P.E.S. from the King Abdullah University of Science and Technology (KAUST).

PY - 2019/5/16

Y1 - 2019/5/16

N2 - A novel anaerobic ammonium-oxidizing (anammox) bacterium was detected in an upflow column reactor treating synthetic nitrogen-rich saline solution. Here, we assembled a 4.59-Mb draft genome sequence of this bacterium, identified as a member of the genus “Candidatus Scalindua,” that has 84% nucleotide-level genomic similarity with the closest related anammox bacterium (“Candidatus Scalindua rubra”).

AB - A novel anaerobic ammonium-oxidizing (anammox) bacterium was detected in an upflow column reactor treating synthetic nitrogen-rich saline solution. Here, we assembled a 4.59-Mb draft genome sequence of this bacterium, identified as a member of the genus “Candidatus Scalindua,” that has 84% nucleotide-level genomic similarity with the closest related anammox bacterium (“Candidatus Scalindua rubra”).

UR - http://hdl.handle.net/10754/656195

UR - http://genomea.asm.org/lookup/doi/10.1128/MRA.00297-19

UR - http://www.scopus.com/inward/record.url?scp=85066291641&partnerID=8YFLogxK

U2 - 10.1128/mra.00297-19

DO - 10.1128/mra.00297-19

M3 - Article

C2 - 31097503

SN - 2576-098X

VL - 8

JO - Microbiology Resource Announcements

JF - Microbiology Resource Announcements

IS - 20

ER -

Draft Genome Sequence of a Novel Marine Anaerobic Ammonium-Oxidizing Bacterium, “Candidatus Scalindua sp.”

Abstract

Bibliographical note

UN SDGs

Access to Document

Other files and links

Fingerprint

anaerobic ammonium oxidation (anammox) reactors Genome sequencing and assembly

Cite this

Draft Genome Sequence of a Novel Marine Anaerobic Ammonium-Oxidizing Bacterium, “Candidatus Scalindua sp.”

Abstract

Bibliographical note

UN SDGs

Access to Document

Other files and links

Fingerprint

Datasets

anaerobic ammonium oxidation (anammox) reactors Genome sequencing and assembly

Cite this