A practical workflow for making anatomical atlases for biological research

Yong Wan; A. Kelsey Lewis; Mary Colasanto; Mark Van Langeveld; Gabrielle Kardon; Charles Hansen

doi:10.1109/MCG.2012.64

A practical workflow for making anatomical atlases for biological research

Yong Wan, A. Kelsey Lewis, Mary Colasanto, Mark Van Langeveld, Gabrielle Kardon, Charles Hansen

Research output: Contribution to journal › Article › peer-review

4 Scopus citations

Abstract

The anatomical atlas has been at the intersection of science and art for centuries. With certain adaptations, the computer graphics artist's workflow and tools are practical for building high-quality atlases, essential to biological and medical research. Using this workflow, researchers built an atlas of the mouse limb musculoskeletal system © 2012 IEEE.

Original language	English (US)
Pages (from-to)	70-80
Number of pages	11
Journal	IEEE Computer Graphics and Applications
Volume	32
Issue number	5
DOIs	https://doi.org/10.1109/MCG.2012.64
State	Published - Sep 2012
Externally published	Yes

Bibliographical note

KAUST Repository Item: Exported on 2021-07-02
Acknowledgements: Yong Wan and A. Kelsey Lewis contributed equally to this work. This research is supported by King Abdullah University of Science and Technology award KUS-C1-016-04; the US Department of Energy Scientific Discovery through Advanced Computing Visualization and Analytics Center for Enabling Technologies and Institute of Scalable Data Management, Analysis, and Visualization; US National Science Foundation grant OCI-0906379; and US National Institutes of Health grants NIH-1R01GM098151-01 and R01HD053728 NICHD. We thank Ronen Schweitzer of Oregon Health & Science University for the Scx-GFP mice; Chris Rodesch, director of the University of Utah’s Fluorescence Microscopy Facility; Chems Touati of the University of Utah’s Scientific Computing and Imaging Institute for making the demo video; and student participants Hongyuan Li and Damean Lyon.
This publication acknowledges KAUST support, but has no KAUST affiliated authors.

ASJC Scopus subject areas

Computer Graphics and Computer-Aided Design
Software

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10.1109/MCG.2012.64

Cite this

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title = "A practical workflow for making anatomical atlases for biological research",

abstract = "The anatomical atlas has been at the intersection of science and art for centuries. With certain adaptations, the computer graphics artist's workflow and tools are practical for building high-quality atlases, essential to biological and medical research. Using this workflow, researchers built an atlas of the mouse limb musculoskeletal system {\textcopyright} 2012 IEEE.",

author = "Yong Wan and Lewis, {A. Kelsey} and Mary Colasanto and {Van Langeveld}, Mark and Gabrielle Kardon and Charles Hansen",

note = "KAUST Repository Item: Exported on 2021-07-02 Acknowledgements: Yong Wan and A. Kelsey Lewis contributed equally to this work. This research is supported by King Abdullah University of Science and Technology award KUS-C1-016-04; the US Department of Energy Scientific Discovery through Advanced Computing Visualization and Analytics Center for Enabling Technologies and Institute of Scalable Data Management, Analysis, and Visualization; US National Science Foundation grant OCI-0906379; and US National Institutes of Health grants NIH-1R01GM098151-01 and R01HD053728 NICHD. We thank Ronen Schweitzer of Oregon Health & Science University for the Scx-GFP mice; Chris Rodesch, director of the University of Utah{\textquoteright}s Fluorescence Microscopy Facility; Chems Touati of the University of Utah{\textquoteright}s Scientific Computing and Imaging Institute for making the demo video; and student participants Hongyuan Li and Damean Lyon. This publication acknowledges KAUST support, but has no KAUST affiliated authors.",

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AU - Hansen, Charles

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A practical workflow for making anatomical atlases for biological research

Abstract

Bibliographical note

ASJC Scopus subject areas

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