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Didier Barradas Bautista

 https://orcid.org/0000-0002-6464-6607
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20192023

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  • Improving classification of correct and incorrect protein-protein docking models by augmenting the training set

    Barradas Bautista, D., Almajed, A., Oliva, R., Kalnis, P. & Cavallo, L., Feb 2 2023, In: Bioinformatics Advances.

    Research output: Contribution to journal › Article › peer-review

  • A Random Forest Classifier for Protein-Protein Docking Models

    Barradas Bautista, D., Cao, Z., Vangone, A., Oliva, R. & Cavallo, L., Dec 10 2021, In: Bioinformatics Advances.

    Research output: Contribution to journal › Article › peer-review

  • Prediction of protein assemblies, the next frontier: The CASP14-CAPRI experiment.

    Lensink, M. F., Brysbaert, G., Mauri, T., Nadzirin, N., Velankar, S., Chaleil, R. A. G., Clarence, T., Bates, P. A., Kong, R., Liu, B., Yang, G., Liu, M., Shi, H., Lu, X., Chang, S., Roy, R. S., Quadir, F., Liu, J., Cheng, J., Antoniak, A., & 88 othersCzaplewski, C., GiełdoŃ, A., Kogut, M., Lipska, A. G., Liwo, A., Lubecka, E. A., Maszota-Zieleniak, M., Sieradzan, A. K., Ślusarz, R., Wesołowski, P. A., ZiĘba, K., Del Carpio Muñoz, C. A., Ichiishi, E., Harmalkar, A., Gray, J. J., Bonvin, A. M. J. J., Ambrosetti, F., Honorato, R. V., Jandova, Z., Jiménez-García, B., Koukos, P. I., Van Keulen, S., van Noort, C. W., Réau, M., Roel-Touris, J., Kotelnikov, S., Padhorny, D., Porter, K. A., Alekseenko, A., Ignatov, M., Desta, I., Ashizawa, R., Sun, Z., Ghani, U., Hashemi, N., Vajda, S., Kozakov, D., Rosell, M., Rodríguez-Lumbreras, L. A., Fernandez-Recio, J., Karczynska, A., Grudinin, S., Yan, Y., Li, H., Lin, P., Huang, S-Y., Christoffer, C., Terashi, G., Verburgt, J., Sarkar, D., Aderinwale, T., Wang, X., Kihara, D., Nakamura, T., Hanazono, Y., Gowthaman, R., Guest, J. D., Yin, R., Taherzadeh, G., Pierce, B. G., Barradas Bautista, D., Cao, Z., Cavallo, L., Oliva, R., Sun, Y., Zhu, S., Shen, Y., Park, T., Woo, H., Yang, J., Kwon, S., Won, J., Seok, C., Kiyota, Y., Kobayashi, S., Harada, Y., Takeda-Shitaka, M., Kundrotas, P. J., Singh, A., Vakser, I. A., DapkŪnas, J., Olechnovič, K., Venclovas, Č., Duan, R., Qiu, L., Zhang, S., Zou, X. & Wodak, S. J., Aug 28 2021, In: Proteins.

    Research output: Contribution to journal › Article › peer-review

    22 Scopus citations

  • The CASP13-CAPRI targets as case studies to illustrate a novel scoring pipeline integrating CONSRANK with clustering and interface analyses

    Barradas Bautista, D., Cao, Z., Cavallo, L. & Oliva, R., Sep 16 2020, In: BMC Bioinformatics. 21, S8

    Research output: Contribution to journal › Article › peer-review

    3 Scopus citations

  • Blind prediction of homo- and hetero- protein complexes: The CASP13-CAPRI experiment.

    Lensink, M. F., Brysbaert, G., Nadzirin, N., Velankar, S., Chaleil, R. A. G., Gerguri, T., Bates, P. A., Laine, E., Carbone, A., Grudinin, S., Kong, R., Liu, R-R., Xu, X-M., Shi, H., Chang, S., Eisenstein, M., Karczynska, A., Czaplewski, C., Lubecka, E., Lipska, A., & 85 othersKrupa, P., Mozolewska, M., Golon, Ł., Samsonov, S., Liwo, A., Crivelli, S., Pagès, G., Karasikov, M., Kadukova, M., Yan, Y., Huang, S-Y., Rosell, M., Rodríguez-Lumbreras, L. A., Romero-Durana, M., Díaz-Bueno, L., Fernandez-Recio, J., Christoffer, C., Terashi, G., Shin, W-H., Aderinwale, T., Raghavendra Maddhuri Venkata Subraman, S., Kihara, D., Kozakov, D., Vajda, S., Porter, K., Padhorny, D., Desta, I., Beglov, D., Ignatov, M., Kotelnikov, S., Moal, I. H., Ritchie, D. W., Chauvot de Beauchêne, I., Maigret, B., Devignes, M-D., Echartea, M. E. R., Barradas Bautista, D., Cao, Z., Cavallo, L., Oliva, R., Cao, Y., Shen, Y., Baek, M., Park, T., Woo, H., Seok, C., Braitbard, M., Bitton, L., Scheidman-Duhovny, D., DapkŪnas, J., Olechnovič, K., Venclovas, Č., Kundrotas, P. J., Belkin, S., Chakravarty, D., Badal, V. D., Vakser, I. A., Vreven, T., Vangaveti, S., Borrman, T., Weng, Z., Guest, J. D., Gowthaman, R., Pierce, B. G., Xu, X., Duan, R., Qiu, L., Hou, J., Ryan Merideth, B., Ma, Z., Cheng, J., Zou, X., Koukos, P. I., Roel-Touris, J., Ambrosetti, F., Geng, C., Schaarschmidt, J., Trellet, M. E., Melquiond, A. S. J., Xue, L., Jiménez-García, B., van Noort, C. W., Honorato, R. V., Bonvin, A. M. J. J. & Wodak, S. J., Oct 14 2019, In: Proteins. 87, 12, p. 1200-1221 22 p.

    Research output: Contribution to journal › Article › peer-review

    63 Scopus citations

  • Modeling the Game of Go by Ising Hamiltonian, Deep Belief Networks and Common Fate Graphs

    Rojas-Domínguez, A., Barradas Bautista, D. & Alvarado, M., 2019, In: IEEE Access. 7, p. 120117-120127 11 p.

    Research output: Contribution to journal › Article › peer-review